AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-V7FTFXA2P

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGK TypeV FunctionalFalse Length304 nt
SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGK / V
Functional iFalse
Length304 nt
Protein UID iRHESUS-VP-MFJXBN (shared by alleles with the same V-REGION amino-acid sequence)

Allele names i

Every name below denotes this exact sequence (RHESUS-V7FTFXA2P). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV2-CGHM*10 IgLabel OGRDB
IGKV2-RQVU*01_t8c_c20t_t36c_c75t_c88t_c114t_t162c_c222g_c308a_336cc337 VDJbase MUSA

External records i

OGRDB: IGKV2-CGHM*10

Contributed by MUSA, OGRDB. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsAACAGTGCTACATCCTGGAACAGAAACC MUSA RHESUS-R6UWWX

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGAGGCTCCCTGCTCAGCTCCTGGGACTGCTGATGCTCTGGGTCCCTGGTGAACTAGTGGG 51 + 11 nt MUSA RHESUS-LXXJXB

Find similar alleles

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-V7FTFXA2P/similar?min_identity=0.95&kind=nt.

Coding sequence (nt)

304 nt
GACATTCCGTTGACCCAGATTCCACTGTCCCTGCCCGTCACACCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCTTGCATAGTAATGGAAACACCTATTTACATTGCTACCTGCAGAAGCCAGGCCAGTCTCCACAGCTCTTGATCTATGAGGTTTCCAACCGGGCCTCTGGAGTCCCAGAGAGGTTCAGTGGCAGTGGGTCAGACACTGATTTCACACTGAAAATCAACCTGGTGGAGGCTGAGGATGTTGGGGTTTATTACTGCATGCAGACTACACAATGGCCCCCCC

Amino-acid sequence (V-REGION)

101 aa
DIPLTQIPLSLPVTPGEPASISCRSSQSLLHSNGNTYLHCYLQKPGQSPQLLIYEVSNRASGVPERFSGSGSDTDFTLKINLVEAEDVGVYYCMQTTQWPP

Translated here from the nucleotide sequence; no source published a protein for this allele. i