RHESUS-VCN5SOZYJ

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGH TypeV FunctionalTrue Length296 nt

IGHV3-120*01_W5875, IGHV3-176*03: a Macaca mulatta IGH V allele sequence, 296 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Species	Macaca mulatta (NCBITAXON:9544)
Locus / type	IGH / V
Functional i	True
Length	296 nt
Protein UID i	RHESUS-VP-A5RQVX (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

296 nt

GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACGACTACATGGAGTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTTGGACAAATTAATCCTAATGGGGGTACCACATTCCTCATGGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTTTATCTGCAAATTAACAGCCTGAAAATAGAGGACACGGCCGTGTATTACTGTACTAGACA

Amino-acid sequence (V-REGION)

98 aa

EVQLVESGGGLVQPGGSLRLSCAASGFTFSDDYMEWVRQAPGKGLEWVGQINPNGGTTFLMDSVKGRFTISRDNAKNTLYLQINSLKIEDTAVYYCTR

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-VCN5SOZYJ). None is canonical; they are labels, and the UID is the key.

Multiple allele designations. This one sequence is recorded under 2 different allele designations: IGHV3-120*01_W5875, IGHV3-176*03. These are identical normalized nucleotide sequences with different attributed names.

Name	Scheme	Source(s)
IGHV3-120*01_W5875	Guo	Guo
IGHV3-176*03	IgLabel	MUSA
IGHV3-176*03	IMGT	IMGT

External records i

GenBank: GENBANK:IMGT000099 IMGT: IGHV3-176*03

Contributed by Guo, IMGT, MUSA. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAATGAGGGGAGGTCAGTGTGAGCCCAGACACAAACC	IMGT	RHESUS-RJFN2T

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGAAGTTCGGGCCGAGCTGGGTTTTCCTTGTTGCTATTTTCAAAGGTGTCCAGTGT	46 + 11 nt	IMGT	RHESUS-LA5SI5

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VCN5SOZYJ/similar?min_identity=0.95&kind=nt.

API: JSON · AIRR AlleleDescription · aliases