AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RJFN2T

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT MUSA
CACAATG HEPTAMER 7 nt AGGGGAGGTCAGTGTGAGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAATGAGGGGAGGTCAGTGTGAGCCCAGACACAAACC

Find similar RSS

Alleles with this RSS variant

9 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-176*01 RHESUS IGH IMGT MUSA RHESUS-VIPOPFDSS
IGHV3-10*01 RHESUS IGH IMGT MUSA RHESUS-VGXNYMZBN
IGHV3-176*03 RHESUS IGH IMGT RHESUS-VCN5SOZYJ
LJI.Rh_IGHV3.120_S4231 RHESUS IGH MUSA RHESUS-VI3SOLKYN
IGHV3-3NC3*02 RHESUS IGH MUSA RHESUS-VGIMDLWW3
IGHV3-ACI*01 RHESUS IGH MUSA RHESUS-VLW22O22F
IGHV3-3NC3*04_c127t RHESUS IGH MUSA RHESUS-V5K2X6NDO
IGHV3-3NC3*05 RHESUS IGH MUSA RHESUS-VDFZPIBQO
IGHV3-120*01_W9360 RHESUS IGH MUSA RHESUS-VAL5NIRB7