RHESUS-VFXKQSU6U
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGLV13-25ZB*02_i0ctgtggtc_6----9_t11a_c20a_a21g_t23c_t25c_29gagag33_c38g_c40a_g43a_g48c_a49c_g52t_g56c_t62-_a64c_c65t_67ctca70_g73a_a76g_a79t_a80g_t81g_t83-_t84-_g85-_a87c_a109c_t112a_114gtgcagaga122_t124a_a133g_a134t_a140g_i148t_149gcacc153_155aaaa158_t161g_a164c_g166c_168atcc171_193ccac196_c199a_g200t_c203t_t205c_c206a_208ttctaa213_a221g_c223g_g224t_226----229_t231a_g233c_t235c_a239c_248---tct253_c257g_g259c_c260t_c261g_263agtg266_a268g_c270t_a271t_t272c_g274c_276gaat279_c281g_a285g_g286a_289----292_g297c_c299g_t300a_c303a_a305g_t306g_t307c_313-gct316_g321a_g326-_c330t_a331c_336tgcctgcctcgccctcatgccccttcctccc366: a Macaca mulatta IGL V allele sequence, 303 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGL / V |
| Functional i | False |
| Length | 303 nt |
| Protein UID i | RHESUS-VP-NBUDXN (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VFXKQSU6U). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGLV13-25ZB*02_i0ctgtggtc_6----9_t11a_c20a_a21g_t23c_t25c_29gagag33_c38g_c40a_g43a_g48c_a49c_g52t_g56c_t62-_a64c_c65t_67ctca70_g73a_a76g_a79t_a80g_t81g_t83-_t84-_g85-_a87c_a109c_t112a_114gtgcagaga122_t124a_a133g_a134t_a140g_i148t_149gcacc153_155aaaa158_t161g_a164c_g166c_168atcc171_193ccac196_c199a_g200t_c203t_t205c_c206a_208ttctaa213_a221g_c223g_g224t_226----229_t231a_g233c_t235c_a239c_248---tct253_c257g_g259c_c260t_c261g_263agtg266_a268g_c270t_a271t_t272c_g274c_276gaat279_c281g_a285g_g286a_289----292_g297c_c299g_t300a_c303a_a305g_t306g_t307c_313-gct316_g321a_g326-_c330t_a331c_336tgcctgcctcgccctcatgccccttcctccc366 | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACCCTGGTCAAGCTCTGCCCCAAAGGTCCCAAGTTCA | MUSA | RHESUS-R37GLX |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VFXKQSU6U/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases