AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-R37GLX

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (38 nt)
Sources MUSA
CACCCTG HEPTAMER 7 nt GTCAAGCTCTGCCCCAAAGGTC spacer · 22 nt CCAAGTTCA NONAMER 9 nt
Heptamer Spacer (22 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

38 nt
CACCCTGGTCAAGCTCTGCCCCAAAGGTCCCAAGTTCA

Find similar RSS

Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGLV12-LWMG*01_i0ctgtggtc_6----9_t11a_a15t_c20a_a21g_t25c_29gagag33_t37g_c38g_40atga43_g48c_a49c_c50t_g52t_a55-_g56-_g57-_t62c_g68t_t72a_a78g_80ctgga84_a106g_a108c_t112a_a113g_t117a_c118g_t121-_g122a_t124a_t125a_a133g_a134t_c149-_t150-_g151-_155---------------169_193ccaa196_g198a_a199c_g200a_g208-_g209-_g210-_t216-_g220c_g222c_c223a_t227g_t231c_c234t_i236t_c237a_g239c_t240c_c248g_a249g_g252t_a256g_258cccc261_g267c_a268c_c269a_272-ggc275_g278a_g279a_281tgggcttctc290_t294a_g295t_a296g_g298c_t300a_t304c_t307g_t310g_t312g_c313g_c317-_a318g_a323t_c324g_a325t_i327t_a328t_g332a_t333g_a335c_t336a_t339g_c340t_342ctgctgcctgccttgccctcatgccccttcctccc376 RHESUS IGL MUSA RHESUS-VXRJX7NFI
IGLV13-25ZB*02_i0ctgtggtc_6----9_t11a_c20a_a21g_t23c_t25c_29gagag33_c38g_c40a_g43a_g48c_a49c_g52t_g56c_t62-_a64c_c65t_67ctca70_g73a_a76g_a79t_a80g_t81g_t83-_t84-_g85-_a87c_a109c_t112a_114gtgcagaga122_t124a_a133g_a134t_a140g_i148t_149gcacc153_155aaaa158_t161g_a164c_g166c_168atcc171_193ccac196_c199a_g200t_c203t_t205c_c206a_208ttctaa213_a221g_c223g_g224t_226----229_t231a_g233c_t235c_a239c_248---tct253_c257g_g259c_c260t_c261g_263agtg266_a268g_c270t_a271t_t272c_g274c_276gaat279_c281g_a285g_g286a_289----292_g297c_c299g_t300a_c303a_a305g_t306g_t307c_313-gct316_g321a_g326-_c330t_a331c_336tgcctgcctcgccctcatgccccttcctccc366 RHESUS IGL MUSA RHESUS-VFXKQSU6U
IGLV3-34KT*03_i0ctgtgg_c3t_t4c_g7-_a8-_g9a_t11a_g19c_t24c_g25c_28ggagag33_c38g_t40a_g43a_t48-_a49c_a51t_a55-_g56-_t62c_g68t_c70t_a71c_c78g_80ctggagc86_a106g_c107a_t109a_t111a_t112a_a113g_a117-_c120a_t121g_g122a_t124a_a133g_a134t_t146-_152-------158_t161c_t163c_165---a168_a194g_a197c_c198t_g200a_g201a_c202t_t205c_g208c_g209a_213gctc216_g220c_c223t_g224t_a225c_t227a_c228a_t229c_234----g238_c240t_t247a_251---c254_a256c_a258c_g259a_t261c_c263t_t266a_g267c_c269g_c270g_a271c_c273g_c275a_t276g_g277t_283----286_g288c_g289t_a290c_t294a_g295t_a296g_g298c_t300a_t304c_t307g_t310g_t312a_c315a_317ggca320_322tgtgctt328_c330t_g332a_t333g_c336a_t339g_c340t_342ctgctgcctgcctcgccctcatgccccttcctccc376 RHESUS IGL MUSA RHESUS-V74JOFVWA
IGLV3-BR3M*05_i0ctgtgg_t4c_g7-_a8-_g9a_t11a_g19c_c21g_t24c_g25c_29gagag33_c38g_t40a_g43a_g48-_a49c_a51t_a55-_g56-_g57c_t62c_g68t_c70t_a71c_c78g_g80-_c82t_t83g_c84g_a87c_c108a_t109c_t111a_t112a_114gtgc117_c120a_t121g_g122a_t124a_a133g_a134t_c149-_t150-_g151-_155---------------169_a199c_a200c_c201a_c204a_g206a_g214-_g215-_g216-_a222-_g226c_g228c_c229a_t233g_t237c_g238a_c240t_c243t_g245a_t247c_c248t_a249g_a252g_a253t_c257g_a258c_g259c_t261c_t262c_c263a_t265c_g267t_a268c_270acagg274_g278a_g279a_281tgggct286_g288c_g289t_a290c_293gatg296_g298c_t300a_t304c_t307g_t310g_t312a_g314a_c315a_317ggca320_322tgtgctt328_g332a_t333g_c336a_t339g_c340t_342ctgctgcctgcctcgccctcatgccccttcctccc376 RHESUS IGL MUSA RHESUS-VX2AHRPUC
IGLV3-GLHT*01_i0ctgtgg_t4c_g7-_a8-_g9a_t11a_g19c_c21g_t24c_g25c_29gagag33_c38g_t40a_g43a_g48-_a49c_a51t_a55-_g56-_g57c_t62c_g68t_c70t_a71c_c78g_g80-_c82t_t83g_c84g_a87c_c108g_t109c_t111a_t112a_114gtgc117_c120a_t121g_g122a_t124a_a133g_a134t_t146-_152-------158_t161c_t163c_165---a168_a194g_t196c_a197c_c198t_g200a_g201a_c202t_t205c_g208c_g209a_c213g_c215-_a216-_g220-_g221t_g224a_a225g_229----232_c234a_t235a_247ggtac251_a253g_a254c_a256c_258cacc261_c263t_t265c_t266a_g267c_c269g_c270g_a271c_c273g_c275a_t276g_g277t_283----286_g288c_g289t_a290c_t294a_g295t_a296g_g298c_t300a_t304c_t307g_t310g_t312g_g314a_c315a_317ggca320_g322t_a323g_325gctt328_g332a_t333g_a335c_c336a_t339g_c340t_342ctgctgcctgccttgccctcatgccccttcctccc376 RHESUS IGL MUSA RHESUS-VYAD6MFCE