RHESUS-VYAD6MFCE
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGLV3-GLHT*01_i0ctgtgg_t4c_g7-_a8-_g9a_t11a_g19c_c21g_t24c_g25c_29gagag33_c38g_t40a_g43a_g48-_a49c_a51t_a55-_g56-_g57c_t62c_g68t_c70t_a71c_c78g_g80-_c82t_t83g_c84g_a87c_c108g_t109c_t111a_t112a_114gtgc117_c120a_t121g_g122a_t124a_a133g_a134t_t146-_152-------158_t161c_t163c_165---a168_a194g_t196c_a197c_c198t_g200a_g201a_c202t_t205c_g208c_g209a_c213g_c215-_a216-_g220-_g221t_g224a_a225g_229----232_c234a_t235a_247ggtac251_a253g_a254c_a256c_258cacc261_c263t_t265c_t266a_g267c_c269g_c270g_a271c_c273g_c275a_t276g_g277t_283----286_g288c_g289t_a290c_t294a_g295t_a296g_g298c_t300a_t304c_t307g_t310g_t312g_g314a_c315a_317ggca320_g322t_a323g_325gctt328_g332a_t333g_a335c_c336a_t339g_c340t_342ctgctgcctgccttgccctcatgccccttcctccc376: a Macaca mulatta IGL V allele sequence, 303 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGL / V |
| Functional i | False |
| Length | 303 nt |
| Protein UID i | RHESUS-VP-MYP3F7 (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VYAD6MFCE). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGLV3-GLHT*01_i0ctgtgg_t4c_g7-_a8-_g9a_t11a_g19c_c21g_t24c_g25c_29gagag33_c38g_t40a_g43a_g48-_a49c_a51t_a55-_g56-_g57c_t62c_g68t_c70t_a71c_c78g_g80-_c82t_t83g_c84g_a87c_c108g_t109c_t111a_t112a_114gtgc117_c120a_t121g_g122a_t124a_a133g_a134t_t146-_152-------158_t161c_t163c_165---a168_a194g_t196c_a197c_c198t_g200a_g201a_c202t_t205c_g208c_g209a_c213g_c215-_a216-_g220-_g221t_g224a_a225g_229----232_c234a_t235a_247ggtac251_a253g_a254c_a256c_258cacc261_c263t_t265c_t266a_g267c_c269g_c270g_a271c_c273g_c275a_t276g_g277t_283----286_g288c_g289t_a290c_t294a_g295t_a296g_g298c_t300a_t304c_t307g_t310g_t312g_g314a_c315a_317ggca320_g322t_a323g_325gctt328_g332a_t333g_a335c_c336a_t339g_c340t_342ctgctgcctgccttgccctcatgccccttcctccc376 | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACCCTGGTCAAGCTCTGCCCCAAAGGTCCCAAGTTCA | MUSA | RHESUS-R37GLX |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VYAD6MFCE/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases