RHESUS-VX2AHRPUC
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGLV3-BR3M*05_i0ctgtgg_t4c_g7-_a8-_g9a_t11a_g19c_c21g_t24c_g25c_29gagag33_c38g_t40a_g43a_g48-_a49c_a51t_a55-_g56-_g57c_t62c_g68t_c70t_a71c_c78g_g80-_c82t_t83g_c84g_a87c_c108a_t109c_t111a_t112a_114gtgc117_c120a_t121g_g122a_t124a_a133g_a134t_c149-_t150-_g151-_155---------------169_a199c_a200c_c201a_c204a_g206a_g214-_g215-_g216-_a222-_g226c_g228c_c229a_t233g_t237c_g238a_c240t_c243t_g245a_t247c_c248t_a249g_a252g_a253t_c257g_a258c_g259c_t261c_t262c_c263a_t265c_g267t_a268c_270acagg274_g278a_g279a_281tgggct286_g288c_g289t_a290c_293gatg296_g298c_t300a_t304c_t307g_t310g_t312a_g314a_c315a_317ggca320_322tgtgctt328_g332a_t333g_c336a_t339g_c340t_342ctgctgcctgcctcgccctcatgccccttcctccc376: a Macaca mulatta IGL V allele sequence, 303 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGL / V |
| Functional i | False |
| Length | 303 nt |
| Protein UID i | RHESUS-VP-6C6U7L (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VX2AHRPUC). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGLV3-BR3M*05_i0ctgtgg_t4c_g7-_a8-_g9a_t11a_g19c_c21g_t24c_g25c_29gagag33_c38g_t40a_g43a_g48-_a49c_a51t_a55-_g56-_g57c_t62c_g68t_c70t_a71c_c78g_g80-_c82t_t83g_c84g_a87c_c108a_t109c_t111a_t112a_114gtgc117_c120a_t121g_g122a_t124a_a133g_a134t_c149-_t150-_g151-_155---------------169_a199c_a200c_c201a_c204a_g206a_g214-_g215-_g216-_a222-_g226c_g228c_c229a_t233g_t237c_g238a_c240t_c243t_g245a_t247c_c248t_a249g_a252g_a253t_c257g_a258c_g259c_t261c_t262c_c263a_t265c_g267t_a268c_270acagg274_g278a_g279a_281tgggct286_g288c_g289t_a290c_293gatg296_g298c_t300a_t304c_t307g_t310g_t312a_g314a_c315a_317ggca320_322tgtgctt328_g332a_t333g_c336a_t339g_c340t_342ctgctgcctgcctcgccctcatgccccttcctccc376 | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACCCTGGTCAAGCTCTGCCCCAAAGGTCCCAAGTTCA | MUSA | RHESUS-R37GLX |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VX2AHRPUC/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases