RHESUS-VXRJX7NFI
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGLV12-LWMG*01_i0ctgtggtc_6----9_t11a_a15t_c20a_a21g_t25c_29gagag33_t37g_c38g_40atga43_g48c_a49c_c50t_g52t_a55-_g56-_g57-_t62c_g68t_t72a_a78g_80ctgga84_a106g_a108c_t112a_a113g_t117a_c118g_t121-_g122a_t124a_t125a_a133g_a134t_c149-_t150-_g151-_155---------------169_193ccaa196_g198a_a199c_g200a_g208-_g209-_g210-_t216-_g220c_g222c_c223a_t227g_t231c_c234t_i236t_c237a_g239c_t240c_c248g_a249g_g252t_a256g_258cccc261_g267c_a268c_c269a_272-ggc275_g278a_g279a_281tgggcttctc290_t294a_g295t_a296g_g298c_t300a_t304c_t307g_t310g_t312g_c313g_c317-_a318g_a323t_c324g_a325t_i327t_a328t_g332a_t333g_a335c_t336a_t339g_c340t_342ctgctgcctgccttgccctcatgccccttcctccc376: a Macaca mulatta IGL V allele sequence, 303 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGL / V |
| Functional i | False |
| Length | 303 nt |
| Protein UID i | RHESUS-VP-MYP3F7 (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VXRJX7NFI). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGLV12-LWMG*01_i0ctgtggtc_6----9_t11a_a15t_c20a_a21g_t25c_29gagag33_t37g_c38g_40atga43_g48c_a49c_c50t_g52t_a55-_g56-_g57-_t62c_g68t_t72a_a78g_80ctgga84_a106g_a108c_t112a_a113g_t117a_c118g_t121-_g122a_t124a_t125a_a133g_a134t_c149-_t150-_g151-_155---------------169_193ccaa196_g198a_a199c_g200a_g208-_g209-_g210-_t216-_g220c_g222c_c223a_t227g_t231c_c234t_i236t_c237a_g239c_t240c_c248g_a249g_g252t_a256g_258cccc261_g267c_a268c_c269a_272-ggc275_g278a_g279a_281tgggcttctc290_t294a_g295t_a296g_g298c_t300a_t304c_t307g_t310g_t312g_c313g_c317-_a318g_a323t_c324g_a325t_i327t_a328t_g332a_t333g_a335c_t336a_t339g_c340t_342ctgctgcctgccttgccctcatgccccttcctccc376 | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACCCTGGTCAAGCTCTGCCCCAAAGGTCCCAAGTTCA | MUSA | RHESUS-R37GLX |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VXRJX7NFI/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases