RHESUS-VO44MLL2K
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGLV4-HI2D*01_i0aggctggaccccatagtttt_7cccag11_a13t_c14g_t19-_c20-_c22t_c23g_29-----agg36_c39a_t41c_g42c_g43a_c47g_c48a_c50g_g52-_t53-_c54-_64ctgg67_c69t_a70t_t72c_g75-_a76-_g77-_79ttctt83_c85a_a86c_t90c_c108g_t109g_111-------117_121gcag124_t126g_a128t_a134c_g135a_c136g_g140a_143gtctgtgg150_g152t_t154c_a155c_t157a_t158g_t161g_t163a_g165c_t168a_a170g_174gagg177_g187c_g188c_c189a_g191c_a194t_c195g_197aggctcaa204_t207g_g209a_a211t_t212c_c214a_c215a_t216g_g224a_t225g_t227c_g233t_c234a_c236g_c237g_g239a_c240g_t247c_g250-_g251-_g252a_c254t_t255a_g256a_c259t_t262a_a263t_c267a_a268t_a271-_t272-_274cttg277_c279g_c282g_287---------295_g297a_g298c_t300c_g301c_t304c_a305c_t307g_c309g_t312c_c313t_316---------------330_c334t: a Macaca mulatta IGL V allele sequence, 271 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGL / V |
| Functional i | False |
| Length | 271 nt |
| Protein UID i | RHESUS-VP-AQJT3K (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VO44MLL2K). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGLV4-HI2D*01_i0aggctggaccccatagtttt_7cccag11_a13t_c14g_t19-_c20-_c22t_c23g_29-----agg36_c39a_t41c_g42c_g43a_c47g_c48a_c50g_g52-_t53-_c54-_64ctgg67_c69t_a70t_t72c_g75-_a76-_g77-_79ttctt83_c85a_a86c_t90c_c108g_t109g_111-------117_121gcag124_t126g_a128t_a134c_g135a_c136g_g140a_143gtctgtgg150_g152t_t154c_a155c_t157a_t158g_t161g_t163a_g165c_t168a_a170g_174gagg177_g187c_g188c_c189a_g191c_a194t_c195g_197aggctcaa204_t207g_g209a_a211t_t212c_c214a_c215a_t216g_g224a_t225g_t227c_g233t_c234a_c236g_c237g_g239a_c240g_t247c_g250-_g251-_g252a_c254t_t255a_g256a_c259t_t262a_a263t_c267a_a268t_a271-_t272-_274cttg277_c279g_c282g_287---------295_g297a_g298c_t300c_g301c_t304c_a305c_t307g_c309g_t312c_c313t_316---------------330_c334t | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | TGCAGCGTTCACCCAGGACACTGACAGGAGACGGGAACA | MUSA | RHESUS-RXK47F |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VO44MLL2K/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases