AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS MOUSE-RLLW2P

SpeciesMOUSE
TypeV-RS · complete signal, 3' of V (38 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt TTGCAACCACATCCTGAGAGTG spacer · 22 nt TCAGAAACC NONAMER 9 nt
Heptamer Spacer (22 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

38 nt
CACAGTGTTGCAACCACATCCTGAGAGTGTCAGAAACC

Find similar RSS

Alleles with this RSS variant

14 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-12*03 MOUSE IGH IMGT MOUSE-VPY4JEFS2
IGHV1-47-11*01 MOUSE IGH IMGT MOUSE-VKFNU2CLK
IGHV1-47-2*01 MOUSE IGH IMGT MOUSE-VNZ6BS2TV
IGHV1-47-3*01 MOUSE IGH IMGT MOUSE-VP53HS7LU
IGHV1-47-32*01 MOUSE IGH IMGT MOUSE-VCBBIDSEL
IGHV1-47-8*01 MOUSE IGH IMGT MOUSE-VK7UMY3J4
IGHV1-47-9*01 MOUSE IGH IMGT MOUSE-VUWQIVMNX
IGHV1-50*01 MOUSE IGH IMGT MOUSE-VSOLVA6Y3
IGHV1-53*01 MOUSE IGH IMGT MOUSE-VQYRSEQM7
IGHV1-59*01 MOUSE IGH IMGT MOUSE-VNR73NEEV
IGHV1-62-3*01 MOUSE IGH IMGT MOUSE-VWW3LK2X6
IGHV1-69*01 MOUSE IGH IMGT MOUSE-V2YYMOVWL
IGHV1-69*03 MOUSE IGH IMGT MOUSE-VF7QXBQJJ
IGHV14-4*02 MOUSE IGH IMGT MOUSE-V5RW3GMNP