RSS RHESUS-RJIZWM

Species	RHESUS
Type	V-RS · complete signal, 3' of V (39 nt)
Sources	MUSA

Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt

CACAATGAGGGGACTTTATTGTGAGCCTGGACACAAACC

Find similar RSS

Alleles with this RSS variant

3 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele name	Species	Locus	Source of this allele–RSS link	Server UID
IGHV11-3ZCZ*01_3acaa6_a8t_10tgtttctca18_20gaca23_c25t_c26t_a27c_g31t_a33g_g36t_t38a_a41c_g42a_c43a_t45g_c47g_g48a_g57c_c65t_c66g_g70a_c71t_t81a_g83t_t85c_a88g_g92t_c93a_g104c_t105c_a109g_a110c_c111t_g113c_g114c_g116c_g117t_120--aat124_126gtat129_a131t_t133c_c137t_g140a_g141a_a142g_g144t_t149a_i158c_t159a_162tgcg165_167gggt170_g173t_t174g_g176a_t177g_g187t_c191a_g193a_c194t_203actt206_226------------237_a240t_g242t_a243c_g247a_t256a_t262-_c263-_c265t_g267a_a268c_c276-_t277-_a283t_c287g_c288t_c290a_g291a_g292c_c297a_g298a_c300t_g301a_t304c_a308t_c309t_g311a_t312a_g315-_g317a	RHESUS	IGH	MUSA	RHESUS-VMWBH6MUG
IGHV11-3ZCZ*01_3acaa6_a8t_10tgtttctca18_20gaca23_c25t_c26t_a27c_g31t_a33g_g36t_t38a_a41c_g42a_c43a_t45g_g48a_g57c_c66g_g70a_g73c_t81a_g83c_t85c_i86cgt_c90a_g92c_a106g_g107c_a109t_a110c_g114c_g116a_g119a_c120t_g123t_c127t_130----133_c137t_g140a_g141a_a142g_g144t_t149a_i158c_t159c_162tgcg165_167gggt170_g173t_t174g_g176a_t177g_c191a_g193a_c194t_203actt206_226------------237_a240t_g242t_a243c_g247a_t256a_g259c_t262-_c263-_c265t_g267a_a268c_c276-_t277-_a283t_c287g_c288t_c290a_g291a_g292c_c297a_g298a_c300t_g301a_t304c_a308t_c309t_g311a_t312a_c314-_g315a_g317a	RHESUS	IGH	MUSA	RHESUS-VJ7RAESTX
IGHV4-6KBL*04_i0aaca_c1a_a2c_g3t_c7t_a8t_g9t_g12-_g15t_18----ca23_c25t_c26t_a27c_g31t_a33g_g36t_t38a_a41c_g42a_c43a_t45g_c47g_g48a_g57c_c65t_c66g_g70a_c71t_t81a_g83t_t85c_t87c_a88g_g104t_c105a_g107c_t108c_c111-_a113g_116tcct119_g122a_i124at_126gtat129_a131t_g133c_c137t_g140a_g141a_a142g_g144t_t149a_t159c_g160a_c163t_165cgag168_a170g_a172t_a175g_g176a_t177a_g191t_c195a_t196a_c198t_207actt210_g224c_226-------------238_g241t_a242c_g246a_c255a_c263-_c264-_c265-_g267a_a268c_c276-_t277-_a283t_c287g_c288t_c290a_g291a_g292c_g297a_g298a_c300t_g301a_t304c_a308t_c309t_g311a_t312a_g315-_g317a	RHESUS	IGH	MUSA	RHESUS-VRXUDWP7M