RHESUS-VMWBH6MUG
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGHV11-3ZCZ*01_3acaa6_a8t_10tgtttctca18_20gaca23_c25t_c26t_a27c_g31t_a33g_g36t_t38a_a41c_g42a_c43a_t45g_c47g_g48a_g57c_c65t_c66g_g70a_c71t_t81a_g83t_t85c_a88g_g92t_c93a_g104c_t105c_a109g_a110c_c111t_g113c_g114c_g116c_g117t_120--aat124_126gtat129_a131t_t133c_c137t_g140a_g141a_a142g_g144t_t149a_i158c_t159a_162tgcg165_167gggt170_g173t_t174g_g176a_t177g_g187t_c191a_g193a_c194t_203actt206_226------------237_a240t_g242t_a243c_g247a_t256a_t262-_c263-_c265t_g267a_a268c_c276-_t277-_a283t_c287g_c288t_c290a_g291a_g292c_c297a_g298a_c300t_g301a_t304c_a308t_c309t_g311a_t312a_g315-_g317a: a Macaca mulatta IGH V allele sequence, 275 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGH / V |
| Functional i | False |
| Length | 275 nt |
| Protein UID i | RHESUS-VP-ILRVDX (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VMWBH6MUG). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGHV11-3ZCZ*01_3acaa6_a8t_10tgtttctca18_20gaca23_c25t_c26t_a27c_g31t_a33g_g36t_t38a_a41c_g42a_c43a_t45g_c47g_g48a_g57c_c65t_c66g_g70a_c71t_t81a_g83t_t85c_a88g_g92t_c93a_g104c_t105c_a109g_a110c_c111t_g113c_g114c_g116c_g117t_120--aat124_126gtat129_a131t_t133c_c137t_g140a_g141a_a142g_g144t_t149a_i158c_t159a_162tgcg165_167gggt170_g173t_t174g_g176a_t177g_g187t_c191a_g193a_c194t_203actt206_226------------237_a240t_g242t_a243c_g247a_t256a_t262-_c263-_c265t_g267a_a268c_c276-_t277-_a283t_c287g_c288t_c290a_g291a_g292c_c297a_g298a_c300t_g301a_t304c_a308t_c309t_g311a_t312a_g315-_g317a | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACAATGAGGGGACTTCATTGTGAGCCTAGACACAAACC | MUSA | RHESUS-RIHVNY |
| v_rs | CACAATGAGGGGACTTTATTGTGAGCCTGGACACAAACC | MUSA | RHESUS-RJIZWM |
Leader
Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.
| Leader (exon 1 + exon 2) | Split | Source | Leader UID |
|---|---|---|---|
| ATGTTCATTTTTCTAACAGCAGTTTATCTTTTTTATTTGGTTGCAACCAGAACCCGTTAACAT | 46 + 17 nt | MUSA | RHESUS-LRAIBE |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VMWBH6MUG/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases