AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RVTPIZ

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (28 nt)
Sources MUSA
AACAGTG HEPTAMER 7 nt TAACGGTTCTAA spacer · 12 nt GCATACACC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
AACAGTGTAACGGTTCTAAGCATACACC

Find similar RSS

Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV2-54DC*05_a2c_t5c_a10c_c15t_a19c_c25t_t26c_28ctca31_c34t_c36t_c39g_a40g_c43g_c44t_t45g_g51c_c52a_c53a_c56t_c57a_g71a_t73g_t75c_g81c_g83a_c84t_t87c_c88a_g90c_t96g_a106g_c110t_t114c_g118a_t120c_t121g_g122c_a125t_t128a_g129a_g139c_g140a_g144a_a150t_g152a_g153a_t155c_c156g_a167t_a168g_t171g_c195a_t198c_c199a_a204t_g208-_a221c_a223c_g225c_t226g_a249t_g250c_c252g_c254g_a255g_t258g_g267c_a269c_a274c_g275c_a279t_c286t_c287a_t288g_a290g_g291a_299cata302_t306c_a308t_c309t_c312t_t314a_318gcac321_a324t_a325c_327ttgggaaccta337 RHESUS IGK MUSA RHESUS-VDYSWQXG2
IGKV2-BIYZ*01_a2c_g4a_t5c_a10c_t19c_c25t_t26c_t28c_c29t_c31a_c34t_c36t_a37c_c39g_a40g_c43g_c44t_t45g_c49g_g51c_c52a_c53a_c56t_c57a_g71a_t73g_t75c_a81c_g83a_c84t_t87c_g88a_a90c_c93t_t96g_a106g_c110t_t120c_t121g_g122c_a126c_g129a_g139c_g140a_c145t_150tcaa153_g155c_c156g_a159g_t162c_c166a_a167t_t171g_t193a_t195a_c199a_c204-_t207c_g208t_a221c_a223c_a225c_t226g_c231t_g247t_a249t_g250c_c254g_a255g_t258g_g267c_a269c_a274c_g275c_a279t_g286t_c287a_t288g_a290g_g291a_g299c_g301t_t302a_t306c_a308t_c309t_c312t_t314a_c316t_318gcac321_a324t_c331g_c332a_t333a_336ta337 RHESUS IGK MUSA RHESUS-VTBNJB7GH
IGKV2-BIYZ*01_a2c_g4a_t5c_a10c_t19c_c25t_t26c_t28c_c29t_c31a_c34t_c36t_a37g_c39g_a40g_c43g_c44t_t45g_c49g_g51c_c52a_c53a_c56t_c57a_c65a_g71a_t73g_t75c_a81c_g83a_c84t_t87c_g88a_a90c_c93t_t96g_a106g_c110t_t120c_t121g_g122c_a126c_g129a_g139c_g140a_c145t_150tcaa153_g155c_c156g_a159g_t162c_c166a_a167t_t171g_t193a_t195a_c199a_c204-_t207c_g208t_a221c_a223c_a225c_t226g_c231t_g247t_a249t_g250c_c254g_a255g_t258g_g267c_a269c_a274c_g275c_a279t_g286t_c287a_t288g_a290g_g291a_g299c_g301t_t302a_t306c_a308t_c309t_c312t_t314a_318gcac321_a324t_c331g_c332a_t333a_336ta337 RHESUS IGK MUSA RHESUS-VOJ7LKP6W
IGKV2-BIYZ*01_a2c_g4a_t5c_a10c_t19c_c25t_t26c_t28c_c29t_c31a_c34t_c36t_a37g_c39g_a40g_c43g_c44t_t45g_c49g_g51c_c52a_c53a_c56t_c57a_g71a_t73g_t75c_a81c_g83a_c84t_t87c_g88a_a90c_c93t_t96g_a106g_c110t_t120c_t121g_g122c_a126c_g129a_g139c_g140a_c145t_150tcaa153_g155c_c156g_a159g_t162c_c166a_a167t_t171g_t193a_t195a_c199a_c204-_t207c_g208t_a221c_a223c_a225c_t226g_c231t_g247t_a249t_g250c_c254g_a255g_t258g_g267c_a269c_a274c_g275c_a279t_g286t_c287a_t288g_a290g_g291a_g299c_g301t_t302a_t306c_a308t_c309t_c312t_t314a_318gcac321_a324t_c331g_c332a_t333a_336ta337 RHESUS IGK MUSA RHESUS-VM3O2F62N
IGKV2-BIYZ*01_g1a_a2c_g4a_t5c_a10c_t19c_c25t_t26c_t28c_c29t_c31a_c34t_c36t_a37g_c39g_a40g_c43g_c44t_t45g_c49g_g51c_c52a_c53a_c56t_c57a_g71a_t73g_t75c_a81c_g83a_c84t_t87c_g88a_a90c_c93t_t96g_a106g_c110t_t120c_t121g_g122c_a126c_g129a_g139c_g140a_c145t_150tcaa153_g155c_c156g_a159g_t162c_c166a_a167t_t171g_t193a_t195a_c199a_c204-_t207c_g208t_a221c_a223c_a225c_t226g_c231t_g247t_a249t_g250c_c254g_a255g_t258g_g267c_a269c_a274c_g275c_a279t_g286t_c287a_t288g_a290g_g291a_g299c_g301t_t302a_t306c_a308t_c309t_c312t_t314a_c316t_318gcac321_a324t_c331g_c332a_t333a_336ta337 RHESUS IGK MUSA RHESUS-VJ5WEYRFH