AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-R6AAZB

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources HUSA IMGT
CACAGTG HEPTAMER 7 nt AGGGGAGGTCAGTGTGAGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAGGTCAGTGTGAGCCCAGACACAAACC

Find similar RSS

Alleles with this RSS variant

30 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-11*04 HUMAN IGH HUSA IMGT HUMAN-VRGGL3W7M
IGHV3-11*06 HUMAN IGH HUSA IMGT HUMAN-VMYXRD4DC
IGHV3-21*03 HUMAN IGH HUSA IMGT HUMAN-V7DAXIGNU
IGHV3-25*01 HUMAN IGH IMGT HUMAN-VCI3T5SC2
IGHV3-25*02 HUMAN IGH IMGT HUMAN-VKP7M5GU7
IGHV3-25*03 HUMAN IGH IMGT HUMAN-V3VFNK4GI
IGHV3-25*05 HUMAN IGH IMGT HUMAN-VOST4CB5R
IGHV3-48*02 HUMAN IGH HUSA IMGT HUMAN-VYKUQXX6Z
IGHV3-49*04 HUMAN IGH HUSA IMGT HUMAN-VGNJ2WUUZ
IGHV3-52*01 HUMAN IGH IMGT HUMAN-VEBSFRQJV
IGHV3-52*02 HUMAN IGH IMGT HUMAN-VYXCVIUIZ
IGHV3-53*03 HUMAN IGH IMGT HUMAN-VTYNQYLNF
IGHV3-69-1*02 HUMAN IGH IMGT HUMAN-VUG2TE2G6
IGHV3-65*01 HUMAN IGH IMGT HUMAN-VJUIT2YGZ
IGHV3-65*02 HUMAN IGH IMGT HUMAN-V77E53HYI
IGHV3-65*03 HUMAN IGH IMGT HUMAN-V74GVYZJO
IGHV3-48*03 HUMAN IGH HUSA HUMAN-VQ7QZGYFB
IGHV3-48*01 HUMAN IGH HUSA HUMAN-VY4IJARBM
IGHV3-48*01_S0626 HUMAN IGH HUSA HUMAN-VP74AACZ5
IGHV3-21*01 HUMAN IGH HUSA HUMAN-VBBDD5WKF
IGHV3-48*04 HUMAN IGH HUSA HUMAN-VVVEGIFCE
IGHV3-3H2D*03 HUMAN IGH HUSA HUMAN-VLQEGXMTX
IGHV3-11*01 HUMAN IGH HUSA HUMAN-VXXWTVGWE
IGHV3-15*01 HUMAN IGH HUSA HUMAN-VGKNGACVF
IGHV3-15*01_S2533 HUMAN IGH HUSA HUMAN-V53K3MYL3
IGHV3-15*07 HUMAN IGH HUSA HUMAN-VEBQXDLNK
IGHV3-15*07_S2157 HUMAN IGH HUSA HUMAN-VGPGNZHZM
IGHV3-73*01_S3139 HUMAN IGH HUSA HUMAN-VEZEL37JJ
IGHV3-53*04 HUMAN IGH HUSA HUMAN-VAWPWFEAU
IGHV3-49*03 HUMAN IGH HUSA HUMAN-VH64XIUIU