RSS RHESUS-RSM7C7

Species	RHESUS
Type	V-RS · complete signal, 3' of V (38 nt)
Sources	MUSA

Heptamer Spacer (22 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

38 nt

ATCAATGTTGTAAATATTTTGGAACCCAAACACAAGTT

Find similar RSS

Alleles with this RSS variant

15 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele name	Species	Locus	Source of this allele–RSS link	Server UID
IGHV1-JHF7*01_c7a_t11c_a63c_c69g_g79a_c90t_t105c_g106a_a107g_t112a_a113t_c114t_g133a_c134a_c135t_c137t_c139g_163-----------173_a176t_c177t_a185g_187tatttg192_c194g_a196g_g198t_a200t_g202t_205---------213_g221a_224tttatt229_c231t_a232g_c236g_238----241_c243a_c245t_a246t_a250g_c251g_254ttgt257_c260a_c261a_a263g_c264a_t266c_g267c_g268a_g270a_c271t_g273a_c276a_g278a_c279t_284----287_g289a_a290c_g291a_294acttc298_c300t_g301c_t304a_t307c_c309a_g311c_g313t_c314t_a316t_g317a_g319a_321tcaatttctga331	RHESUS	IGH	MUSA	RHESUS-V5XVZL5OW
IGHV1-F5R3*01_t5c_c6g_c21t_c69g_t78c_g79a_t105c_c110a_c113t_g120c_c127t_g133a_c134a_c137t_g156a_t158g_a159g_g163t_165--------172_g175a_c177t_187--------------tcg203_c205g_a209t_c213t_g216t_221taac224_g226t_c228t_c230-_c231-_a232t_234ctgt237_g239a_g241c_c243a_c245t_g246t_c249a_a250g_c251g_254ttgt257_g260a_c261a_a263g_c264a_g267c_g268a_g270a_c271t_g273a_276atat279_284tacaga289_g291c_g292t_a293t_a295c_297ctgaa301_g303c_t304g_t307c_a308t_c309t_313aaacatc319_321atttccga328	RHESUS	IGH	MUSA	RHESUS-V4VJYVLH2
IGHV1-F5R3*01_c1t_c6g_c21t_c69t_g79a_t105c_c110a_g112a_c113t_g120c_c127t_g133a_c134a_c137t_g156a_t158g_a159g_g163t_165--------172_g175a_c177t_t186-_g187-_g188-_a190t_a191c_c192g_c194g_a196g_198tgttt202_c205t_g207t_g210c_t211a_c213t_c214t_g216t_g220t_g221c_c223g_g224t_g226a_t227g_c230-_c231-_t233a_a235t_c236t_243ttgtaga249_c251t_g254-_c255-_257tcaaa261_a263t_c264a_t266g_g267a_g268a_g270t_i274t_g275a_279aacttcc285_c288t_g291a_g292t_a293c_g297-_g298-_c300t_g301t_306aaca309_311caattt316_a318c	RHESUS	IGH	MUSA	RHESUS-V54YW5IDS
IGHV1-F5R3*01_c1t_c6g_c21t_c69t_g79a_t105c_c110a_g112a_c113t_g120c_c127t_g133a_c134a_c137t_g156a_t158g_a159g_g163t_165--------172_g175a_c177t_187--------------tcg203_c205g_a209t_c213t_g216t_220ataac224_g226t_c228t_c230-_c231-_a232t_234ctgt237_g239a_g241c_c243a_c245t_g246t_c249a_a250g_c251g_254ttgt257_g260a_c261a_a263g_c264a_g267c_g268a_g270a_c271t_g273a_c276a_g278a_c279t_284tacaga289_g291c_g292t_a293t_a295c_297ctgaa301_g303c_t304g_t307c_a308t_c309t_313aaacatc319_321atttccga328	RHESUS	IGH	MUSA	RHESUS-VEJEFI3JE
IGHV1-F5R3*01_c1t_c6g_c21t_c69g_g79a_t105c_c110a_g112a_c113t_g120c_c127t_g133a_c134a_c137t_g156a_t158g_a159g_g163t_165ttagtaat172_t174c_g176a_c177g_a185g_t186a_g187t_a190t_a191t_c194t_198------203_207ttta210_c214t_a215g_g216t_g220a_g221a_t222g_g224a_g226a_c228t_a229t_231aggg234_236ttgta240_243---a246_c248g_c249a_c251t_g252c_254aatt257_g259a_c261a_t262a_c264t_a265c_g268a_a269t_g270a_t272a_g275a_a277t_g278t_g282c_a283t_g285a_t286a_c287t_291-------t298_c300t_g301t_306aaca309_311caattt316_a318c	RHESUS	IGH	MUSA	RHESUS-VTAADIS27
IGHV1-2BLY*07_g49t_c69g_g79a_c90t_t105c_g106a_a107g_c111t_t112g_a113t_g133a_c134a_c137t_t158c_163ttttagttat172_a174t_a175g_a177g_c185g_g187t_g190t_g191t_c194t_a196t_198----a202_c205t_a206t_g207t_a209t_g210t_t211c_c213g_c214t_g216a_g221c_c222a_g224a_a225t_g226t_230-----ggg237_g239t_a242t_a244g_c245a_c248g_g249a_c251t_g252c_254aatt257_259agaa262_c264t_a265c_g268a_a269t_g270a_t272a_g275a_a277t_g278t_g282c_a283t_t286a_c287t_291-------t298_c300t_g301t_306aata309_311caatctct318	RHESUS	IGH	MUSA	RHESUS-VABLRS4IB
IGHV1-2BLY*07_g24a_g34a_g49t_c69g_g79a_c90t_t105c_g106a_a107g_t112a_a113t_g133a_c134a_c137t_t158c_163ttttagttat172_a174t_a175g_a177g_c185g_t186a_g187t_g190t_g191t_c194t_a196t_198----a202_c205t_a206t_g207t_a209t_g210t_t211c_c213g_c214t_g216a_g221c_c222a_g224a_a225t_g226t_230-----ggg237_g239t_a242t_a244g_c245a_c248g_g249a_c251t_g252c_254aatt257_259agaa262_c264t_a265c_g268a_a269t_g270a_t272a_g275a_a277t_g278t_g282c_a283t_t286a_c287t_291-------t298_c300t_g301t_306aaca309_311caatctct318	RHESUS	IGH	MUSA	RHESUS-VVSQAJHPU
IGHV1-2BLY*07_c7a_t11c_g49t_c69g_g79a_c90t_t105c_g106a_a107g_t112a_a113t_g133a_c134a_c135t_c137t_163-----------tttt177_c185g_g187t_g188a_g190t_g191t_c192g_c194g_a196g_c198t_a200t_g202t_205---------213_g221a_224tttatt229_c231t_a232g_c236g_238----241_c243a_c245t_a246t_g249a_a250g_c251g_254ttgt257_c260a_c261a_a263g_c264a_t266c_g267c_g268a_g270a_c271t_g273a_c276a_g278a_c279t_284----287_g289a_a290c_g291a_294acttc298_c300t_g301c_t304a_t307c_c309a_g311c_g313t_c314t_a316t_g317a_319acatcaatttctga332	RHESUS	IGH	MUSA	RHESUS-V5ZPFPWEJ
IGHV1-2BLY*07_c7a_t11c_g49t_c69g_g79a_c90t_t105c_g106a_a107g_t112a_a113t_g133a_c134a_c135t_c137t_163-----------tttt177_c185g_g187t_g188a_g190t_g191t_c192g_c194g_a196g_c198t_a200t_g202t_205---------213_g216t_g221a_224tttatt229_c231t_a232g_c236g_238----241_c243a_c245t_a246t_g249a_a250g_c251g_254ttgt257_c260a_c261a_a263g_c264a_t266c_g267c_g268a_g270a_c271t_g273a_c276a_g278a_c279t_284----287_g289a_a290c_g291a_294acttc298_c300t_g301c_t304a_t307c_c309a_g311c_g313t_c314t_a316t_g317a_319acatcaatttctga332	RHESUS	IGH	MUSA	RHESUS-V2IKX3TUM
IGHV1-2BLY*07_c7a_t11c_g24a_g49t_c69g_g79a_c90t_t105c_g106a_a107g_t112a_a113t_g133a_c134a_c137t_t158c_163ttttagttat172_a174t_a175g_a177g_c185g_t186a_g187t_g190t_g191t_c194t_a196t_198----a202_c205t_a206t_g207t_a209t_g210t_t211c_c213g_c214t_g216a_g221c_c222a_g224a_a225t_g226t_230-----ggg237_g239t_a242t_a244g_c245a_c248g_g249a_c251t_g252c_254aatt257_259agaa262_c264t_a265c_g268a_a269t_g270a_t272a_g275a_a277t_g278t_g282c_a283t_t286a_c287t_291-------t298_c300t_g301t_306aaca309_311caatctct318	RHESUS	IGH	MUSA	RHESUS-V345OCHCY
IGHV1-2BLY*07_c7a_t11c_g24a_g34a_g49t_c69g_g79a_c90t_t105c_g106a_a107g_t112a_a113t_g133a_c134a_t158c_163ttttagttat172_a174t_a175g_a177g_c185g_t186a_g187t_g190t_g191t_c194t_a196t_198----a202_c205t_a206t_g207t_a209t_g210t_t211c_c213g_c214t_g216a_g221c_c222a_g224a_a225t_g226t_230-----ggg237_g239t_a242t_a244g_c245a_c248g_g249a_c251t_g252c_254aatt257_259agaa262_c264t_a265c_g268a_a269t_g270a_t272a_g275a_a277t_g278t_g282c_a283t_t286a_c287t_291-------t298_c300t_g301t_306aaca309_311caatctct318	RHESUS	IGH	MUSA	RHESUS-VGRS6AK5A
IGHV1-2BLY*07_c7a_t11c_g24a_g34a_g49t_c69g_g79a_c90t_t105c_g106a_a107g_t112a_a113t_g133a_c134a_c137t_t158c_163ttttagttat172_a174t_a175g_a177g_c185g_t186a_g187t_g190t_g191t_c194t_a196t_198----a202_c205t_a206t_g207t_a209t_g210t_t211c_c213g_c214t_g216a_g221c_c222a_g224a_a225t_g226t_230-----ggg237_g239t_a242t_a244g_c245a_c248g_g249a_c251t_g252c_254aatt257_259agaa262_c264t_a265c_g268a_a269t_g270a_t272a_g275a_a277t_g278t_g282c_a283t_t286a_c287t_291-------t298_c300t_g301t_306aaca309_311caatctct318	RHESUS	IGH	MUSA	RHESUS-VMQ37INUD
IGHV1-2BLY*07_c7a_t11c_g24a_g34a_g49t_c69g_g79a_c90t_t105c_g106a_a107g_t112a_a113t_c118t_g128a_g133a_c134a_c137t_t158c_163ttttagttat172_a174t_a175g_a177g_c185g_t186a_g187t_g190t_g191t_c194t_a196t_198----a202_c205t_a206t_g207t_a209t_g210t_t211c_c213g_c214t_g216a_g221c_c222a_g224a_a225t_g226t_230-----ggg237_g239t_a242t_a244g_c245a_c248g_g249a_c251t_g252c_254aatt257_259agaa262_c264t_a265c_g268a_a269t_g270a_t272a_g275a_a277t_g278t_g282c_a283t_t286a_c287t_291-------t298_c300t_g301t_306aaca309_311caatctct318	RHESUS	IGH	MUSA	RHESUS-VALF4YSCN
IGHV1-2BLY*07_c7a_t11c_g24a_g34a_g49t_c69g_g79a_c90t_a103c_t105c_g106a_a107g_t112a_a113t_g128a_g133a_c134a_c137t_t158c_163ttttagttat172_a174t_a175g_a177g_c185g_t186a_g187t_g190t_g191t_c194t_a196t_198----a202_c205t_a206t_g207t_a209t_g210t_t211c_c213g_c214t_g216a_g221c_c222a_g224a_a225t_g226t_230-----ggg237_g239t_a242t_a244g_c245a_c248g_g249a_c251t_g252c_254aatt257_259agaa262_c264t_a265c_g268a_a269t_g270a_t272a_g275a_a277t_g278t_g282c_a283t_t286a_c287t_291-------t298_c300t_g301t_306aaca309_311caatctct318	RHESUS	IGH	MUSA	RHESUS-VF3HEKQRY
IGHV1-2BLY*07_c7a_t11a_g49t_c69g_g79a_c90t_t105c_g106a_a107g_t112a_a113t_g133a_c134a_c135t_c137t_163-----------tttt177_c185g_g187t_g188a_g190t_g191t_c192g_c194g_a196g_c198t_a200t_g202t_205---------213_g221a_224tttatt229_c231t_a232g_c236g_238----241_c243a_c245t_a246t_g249a_a250g_c251g_254ttgt257_c260a_c261a_a263g_c264a_t266c_g267c_g268a_g270a_c271t_g273a_c276a_g278a_c279t_284----287_g289a_a290c_g291a_294acttc298_c300t_g301c_t304a_t307c_c309a_g311c_g313t_c314t_a316t_g317a_319acatcaatttctga332	RHESUS	IGH	MUSA	RHESUS-VSMIDCKCC